Center for Imaging Science : About | Research | Publications | Education | Activities | Downloads | Visiting

BIRN Header home

Software @ CIS : lddmm-surface : Manual

about | lddmm-surface manual | validation | applyDeformation manual | pointShoot manual | faq | credits | changelog | feedback

Typical Usage and Parameters:

ApplyDeformation surface3.byu surface1_10_6.500000_1.750000.template surface1_10_6.500000_1.750000.alpha outputDeformedSurfaceRoot
The following are the command line options. Click on each title to get a detailed description and their typical values.

  1. Surface
  2. Template Points
  3. Alpha File
  4. Output Root
  5. NeighborhoodVSigmaScale (-v)
Detailed Command Line Options:

  1. Surface: Surface in the template ambient space to deform.


  2. Template Points: The "*.template" output file from the lddmm-surface program.


  3. Alpha File: The "*.alpha output file from the lddmm-surface program. The alpha filename MUST be of the form output by the lddmm-surface program because the parameters numTimeSteps, sigmaV, sigmaW are parsed from the filename.


  4. Output Root: Path that specifies the root name of the output data.


  5. NeighborhoodVSigmaScale (-s): Scale factor which specifies the estimated support of the kernels for the Hilbert space of vector fields.


  6. Last Modified: Wednesday, 03-Oct-2007 08:03:13 EDT

NIH                    NCRR                     DHHS                      TeraGrid


 
 




301 Clark Hall
3400 N. Charles Street
Baltimore, MD 21218
Office: (410) 516-3826
Fax: (410)516-4594
webmaster@cis.jhu.edu